BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033D09SP1|AL429738
(843 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig692 1289 0.0
>3x_Contig692
Length = 2077
Score = 1289 bits (646), Expect = 0.0
Identities = 652/658 (99%)
Strand = Plus / Minus
Query: 1 gatcatttttctatttttacataccaaattttaacttaaacttatattaaatgcgtatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gatcatttttctatttttacataccaaattttaacttaaacttatattaaatgcgtatct 602
Query: 61 cactcaattcctgtctctctctacttagtaagcgttactagtaaatcagtaagtattata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cactcaattcctgtctctctctacttagtaagcgttactagtaaatcagtaagtattata 542
Query: 121 cagtttatagggactcatgatatgacaaattgtgacccaagcaagaaaaggatcccccgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cagtttatagggactcatgatatgacaaattgtgacccaagcaagaaaaggatcccccgc 482
Query: 181 catatgtgattacatacaccattggtggtcttgaacttagccttacaaattgtttgataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 catatgtgattacatacaccattggtggtcttgaacttagccttacaaattgtttgataa 422
Query: 241 tgatactctacaaagatgacaaaaagaagactaataaaatgaataagtttgttttttttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgatactctacaaagatgacaaaaagaagactaataaaatgaataagtttgttttttttc 362
Query: 301 cttttgggtaaagaactgaggaaatgcacagaaacagccgaacctttttctttgttgtct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttttgggtaaagaactgaggaaatgcacagaaacagccgaacctttttctttgttgtct 302
Query: 361 ttttttttttttaacggccattcgagccattgaaattttatgtttagaattaaaggrtgt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 301 ttttttttttttaacggccattcgagccattgaaattttatgtttagaattaaaggatgt 242
Query: 421 tttttaagcaaaaggrtaaataaaggracattgacccttcgatagcactagctttcttga 480
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 241 tttttaagcaaaaggataaataaaggaacattgacccttcgatagcactagctttcttga 182
Query: 481 gatttgtttaacagtagccttttcttctctgtaccgtgatatttcattgtacttattagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatttgtttaacagtagccttttcttctctgtaccgtgatatttcattgtacttattagt 122
Query: 541 ttagtatactaagtcaaggktttttttatttagcaaggcattacagttaataaaaactgg 600
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttagtatactaagtcaaggttttttttatttagcaaggcattacagttaataaaaactgg 62
Query: 601 rgaataaggkaataggggaaaatggttaaagttgctattattacatattcgttatatg 658
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaataaggtaataggggaaaatggttaaagttgctattattacatattcgttatatg 4
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,567
Number of Sequences: 1807
Number of extensions: 14567
Number of successful extensions: 239
Number of sequences better than 1.0e-20: 1
length of query: 843
length of database: 10,358,551
effective HSP length: 16
effective length of query: 827
effective length of database: 10,329,639
effective search space: 8542611453
effective search space used: 8542611453
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)